Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815168.1_cds_XP_016498188.1_12243
CDS Infomation

[gene=LOC107816956] [db_xref=GeneID:107816956] [protein=probable serine/threonine-protein kinase At1g54610] [protein_id=XP_016498188.1] [location=join(80980..81393,83316..83600,83924..84241,85546..85773,86153..86253,86412..86526,87059..87529,87621..87827)] [gbkey=CDS]
Sequence

ATGGGTTGTGTTTGCGGTAAGCCCTCTGCCATTGAAGACAGTAGAGATAGTCCAAGGGAG
AGATTGTCGAGTAAAAGTGCTGCAAGTTTGAGAGGGCCAAGGGCTGGTTCATCAAGACGA
GAGGAATCAGCTTATAGGGTTAAAGATCGTTTGGATAGCATTGATGGGAAGGCAATGCTA
ATTGATAAACAAGTAAATGGTTCAGTAAGATTGCAGAGTGAGAATTATGAGAGGAAAAGG
GAAAAGCAAGAGTTTATTGTTGCTACGCATCATCCTGGAATTGGGATATTACCAAAAGGG
AGTGAAGGGGAACAGGTTGCTGCTGGATGGCCACCTTGGCTTGCTGCTGTTGCCGGTGAA
GCTATCAGAGGATGGGTGCCGAGACGAGCTGATTCTTTTGAGAAGCTGGATAAAATTGGT
CAGGGCACCTACAGCAATGTTTACCGTGCTCGTGATCTTGATCAAGGGAAGATCGTCGCT
TTGAAGAAAGTGAGATTTGATAAGCTAGAACCTGAGAGTGTTCGGTTCATGGCGAGGGAG
ATTCACATACTACGGAGGCTTGATCATCCAAACATAATAAAATTAGAAGGTTTAGTTACT
TCTAGGATGTCTTGCAGCCTATACCTTGTATTTGAGTACATGGAGCATGATTTGGCAGGG
TTAGCGTCACACCCTGGTCTTAAGTTTACTGAGTCACAGGTCAAATGTTACATGCAGCAA
CTTTTATGTGGACTTGATCATTGTCACAGTCGTGGTGTTTTACATCGTGATATAAAAGGC
TCCAACCTTTTAATTGACAATAATGGCATATTGAAGATTGCTGATTTTGGTCTTGCTAGC
TTTTTTGATCCTCATCAAAGCCAGCCTCTCACTAGCCGTGTAGTGACTCTCTGGTATCGA
CCTCCCGAACTGCTACTCGGTGCTACTTACTATGGGACTGCTGTGGATTTGTGGAGCACT
GGTTGCATACTTGCAGAACTTTATGCTGGCAAGCCAATAATGCCAGGAAGAACGGAGGTT
GAGCAGCTTCATAAGATTTTCAAACTGTGTGGATCACCTTCTGAGGAGTACTGGAGGAAA
TCGAGGTTGCCCCATGCAACAATCTTCAAGCCCCAACAACCTTATAGGCGTTGTGTTGCA
GAAACATTTAAAGAGTTTCCTGCACCAGCACTAGCACTTATAGAAACTTTACTTTCAATA
GATCCTGCCGATCGTGGGTCATCAGCCTCTGCCTTGAAGAGTGAGTTTTTTACAACAAAG
CCACTTCCTTGTGATCCTTTGAGCTTGCCAAAATATCCTCCGAGCAAGGAATTTGATGCT
AAAGTGCGGGATGAAGAAGCTCGAAGGCAAGCGGCAGCTGGAAACAAGGGTCATAGATAT
GACCTAGAAAGGAGAGGAACGAGAGAATCGCGTGCAGTCCCTGCACCCGAAGCCAATGCT
GAATTAGTTTCATCTATGCAGAAAAGGCAAGGTCAATCCAATTCAAAAAGCAGAAGTGAG
ATGTTCAACTCTCATCAGGAAGAAGTTGCCTCTGGTTTTCCAATTGATCCCCCTAGACCA
TCTCAGGTTGTGGAAGAAGCAAACAATGATCCTCAAGCGCGGCTGCATAAGCGAGGTTCC
CATTCCGGGCCATTGACTCACCGAGCTGCCTGGGCAAAAGCTGGAAAGAATATGGAAGAT
GCCCCAAAACTTTCTGTTGCGGATTTGTCAGCTATGTCTGGTCTAGTCGCTGCGAGGAGA
AGCATGTTCTCTGAAGATCGGCCAGACAAGTCTGGTCCACATAAACAAGAGGTTCCTAAA
CTTATAGCCAGGTTTCCTGGATCCTTCAAAGAGGTCTCACATTCCGCGATGAAACAAGAG
CAGAAAAATCATTCACTTGCGAGCTCACATCAAAATGAGGATGGTAGAACCAGCAACAAT
GATCCTGTTCTTCTGGGATATGGATCAAAAGGCAACAAAATTCACTATTCTGGGCCACTA
CTAGTTCCATCAGGCAAAATGGATCAGATGTTGAAAGATCACGACCGCCATGTCCAAGAA
GCTGTAAGACGGGCACGCTTGGACAAGGCAAAAGCTAAGAAAATTCAGATTGAAGGGAAC
CAATTATCAGCCAATTCATTATTTGTTTCTGGCCGTTGA

Peptide Sequence

PEP ID

XP_016498188.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At1g54610 [Nicotiana tabacum]
Sequence

MGCVCGKPSAIEDSRDSPRERLSSKSAASLRGPRAGSSRREESAYRVKDRLDSIDGKAML
IDKQVNGSVRLQSENYERKREKQEFIVATHHPGIGILPKGSEGEQVAAGWPPWLAAVAGE
AIRGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQGKIVALKKVRFDKLEPESVRFMARE
IHILRRLDHPNIIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTESQVKCYMQQ
LLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPHQSQPLTSRVVTLWYR
PPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWRK
SRLPHATIFKPQQPYRRCVAETFKEFPAPALALIETLLSIDPADRGSSASALKSEFFTTK
PLPCDPLSLPKYPPSKEFDAKVRDEEARRQAAAGNKGHRYDLERRGTRESRAVPAPEANA
ELVSSMQKRQGQSNSKSRSEMFNSHQEEVASGFPIDPPRPSQVVEEANNDPQARLHKRGS
HSGPLTHRAAWAKAGKNMEDAPKLSVADLSAMSGLVAARRSMFSEDRPDKSGPHKQEVPK
LIARFPGSFKEVSHSAMKQEQKNHSLASSHQNEDGRTSNNDPVLLGYGSKGNKIHYSGPL
LVPSGKMDQMLKDHDRHVQEAVRRARLDKAKAKKIQIEGNQLSANSLFVSGR

Transcript Sequence

Gene sequence data has not been registered.